STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_13380Uncharacterized protein. (292 aa)    
Predicted Functional Partners:
PROFUN_03624
Nucleolar protein 58.
   
 
 0.825
PROFUN_03629
Uncharacterized protein.
   
  
 0.646
PROFUN_03000
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.633
PROFUN_10428
RNA helicase.
   
  
 0.574
PROFUN_08345
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.554
PROFUN_08550
Acyl-protein thioesterase 1,2.
    
   0.528
PROFUN_13291
Phospholipase/carboxylesterase.
    
   0.528
PROFUN_11489
Carboxylesterase.
    
   0.528
PROFUN_03831
MYND-type domain-containing protein.
    
   0.528
PROFUN_00265
Phospholipase/Carboxylesterase family protein.
    
   0.528
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.