STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_13770Uncharacterized protein. (715 aa)    
Predicted Functional Partners:
PROFUN_02831
mRNA cap guanine-N7 methyltransferase.
   
 0.999
PROFUN_03716
Transcription elongation factor SPT5.
    
 0.951
PROFUN_01129
Nuclear cap-binding protein subunit 2.
   
 
 0.826
PROFUN_11641
RNA polymerase II core subunit.
   
 0.805
PROFUN_16221
Uncharacterized protein.
    
 0.781
PROFUN_06349
Nuclear receptor corepressor 1 isoform 3.
    
 0.781
PROFUN_09436
RPOL4c domain-containing protein.
    
 0.772
PROFUN_05036
RPOLD domain-containing protein.
   
 0.752
PROFUN_16741
DNA-directed RNA polymerase II subunit 7.
    
  0.747
PROFUN_14145
DNA-directed RNA polymerase II subunit 7.
    
  0.747
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.