STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_13851Arginine N-methyltransferase 2. (365 aa)    
Predicted Functional Partners:
PROFUN_05726
Ribosome biogenesis protein.
   
    0.664
PROFUN_07721
Ribosome biogenesis protein RPF2.
   
    0.660
PROFUN_02437
Putative nucleolar GTP-binding protein 1-like.
   
    0.659
PROFUN_06584
Uncharacterized protein.
   
    0.601
PROFUN_12476
CP-type G domain-containing protein.
   
  
 0.570
PROFUN_05274
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.534
PROFUN_05859
Bms1-type G domain-containing protein.
   
    0.533
PROFUN_08050
Nucleolar complex protein 2.
   
    0.529
PROFUN_04877
Periodic tryptophan protein.
   
    0.527
PROFUN_08010
Ribosome biogenesis protein bop1-like.
   
    0.526
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.