STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_14195WD_REPEATS_REGION domain-containing protein. (501 aa)    
Predicted Functional Partners:
PROFUN_04356
Uncharacterized protein.
    
 0.601
PROFUN_01222
E3 ubiquitin-protein ligase RBX1.
    
 0.601
PROFUN_02915
60S ribosomal protein L8.
    
  0.589
PROFUN_11642
WD_REPEATS_REGION domain-containing protein.
  
 
  0.583
PROFUN_02565
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.562
PROFUN_10938
Uncharacterized protein.
    
 0.562
PROFUN_06098
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.562
PROFUN_05722
Cytosolic glycoprotein FP21; Belongs to the SKP1 family.
    
 0.562
PROFUN_05772
AAA_16 domain-containing protein.
    
 0.561
PROFUN_02238
Nudix (Nucleoside diphosphate linked moiety X)-type motif 12.
    
  0.525
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.