STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_13226Uncharacterized protein. (251 aa)    
Predicted Functional Partners:
PROFUN_08353
Uncharacterized protein.
    
 0.978
PROFUN_06056
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.973
PROFUN_04290
t-SNARE coiled-coil homology domain-containing protein.
   
 0.965
PROFUN_06717
Soluble NSF attachment protein alpha isoform.
    
 0.931
PROFUN_12926
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 
 0.838
PROFUN_06224
Vacuolar protein sorting-associated protein 11 homolog; Belongs to the VPS11 family.
    
 
 0.835
PROFUN_09752
RING-type domain-containing protein.
    
 
 0.834
PROFUN_10288
Syntaxin-7-like isoform 2.
   
 0.822
PROFUN_09755
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.822
PROFUN_13365
V-SNARE coiled-coil homology domain-containing protein.
   
 0.819
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.