STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_11673Uncharacterized protein. (616 aa)    
Predicted Functional Partners:
PROFUN_06559
Glutathione synthetase.
   
 0.960
PROFUN_10147
Uncharacterized protein.
     
 0.896
PROFUN_08995
Cysteine synthase-like.
   
 0.892
PROFUN_01852
Pyridoxal-5'-phosphate-dependent protein subunit beta.
   
 0.892
PROFUN_02986
Uncharacterized protein.
   
 
 0.880
PROFUN_00412
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.875
PROFUN_02081
Aspartate aminotransferase.
     
 0.866
PROFUN_08270
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.866
PROFUN_02609
Aspartate aminotransferase.
     
 0.866
PROFUN_03082
Cysteine dioxygenase.
     
 0.864
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.