STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_08223Integrase_H2C2 domain-containing protein. (278 aa)    
Predicted Functional Partners:
PROFUN_10399
Uncharacterized protein.
    
 0.809
PROFUN_13706
Putative lin-9.
    
 0.525
PROFUN_02253
Uncharacterized protein.
    
 0.511
PROFUN_16430
RT_RNaseH domain-containing protein.
  
     0.502
PROFUN_16324
Putative gag/polymerase/env polyprotein.
  
     0.502
PROFUN_00415
Putative gag/polymerase/env polyprotein.
  
     0.494
PROFUN_12306
Replication factor A protein.
    
 0.488
PROFUN_06970
Spindle assembly protein.
    
 0.488
PROFUN_16200
Retrotransposable element protein.
  
     0.475
PROFUN_16460
Reverse transcriptase domain-containing protein.
  
     0.475
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.