STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_12817PUA domain-containing protein. (47 aa)    
Predicted Functional Partners:
PROFUN_05488
SUI1 domain-containing protein.
   
 
 0.943
PROFUN_02435
Translation factor.
   
 
 0.823
PROFUN_11163
40S ribosomal protein S28.
    
   0.612
PROFUN_06981
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.589
PROFUN_11995
KH type-2 domain-containing protein.
    
   0.576
PROFUN_09409
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
    
   0.576
PROFUN_11954
40S ribosomal protein S9.
   
 
 0.567
PROFUN_07343
40S ribosomal protein S11.
   
   0.565
PROFUN_01268
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
   0.542
PROFUN_03136
40S ribosomal protein S16-like; Belongs to the universal ribosomal protein uS9 family.
   
   0.541
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.