PROFUN_12574 protein (Planoprotostelium fungivorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PROFUN_12574

G-patch domain-containing protein. (572 aa)

Predicted Functional Partners:

PROFUN_00925

0.820

PROFUN_08950

0.820

PROFUN_02344

0.786

PROFUN_01940

0.779

PROFUN_04222

0.771

PROFUN_00742

0.756

PROFUN_06817

0.749

PROFUN_04066

0.742

PROFUN_01641

0.734

PROFUN_02242

0.734

Your Current Organism:

Planoprotostelium fungivorum

NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PROFUN_00742	PROFUN_00925	A0A2P6NUA3	A0A2P6N490	Uncharacterized protein.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like.	0.827
PROFUN_00742	PROFUN_01940	A0A2P6NUA3	A0A2P6NAY1	Uncharacterized protein.	U5 small nuclear ribonucleoprotein component-like protein.	0.831
PROFUN_00742	PROFUN_02242	A0A2P6NUA3	A0A2P6NYC8	Uncharacterized protein.	Pre-mRNA-processing factor 17-like.	0.502
PROFUN_00742	PROFUN_02344	A0A2P6NUA3	A0A2P6NYN3	Uncharacterized protein.	Uncharacterized protein.	0.610
PROFUN_00742	PROFUN_04066	A0A2P6NUA3	A0A2P6NJD9	Uncharacterized protein.	Uncharacterized protein.	0.985
PROFUN_00742	PROFUN_04222	A0A2P6NUA3	A0A2P6NVY5	Uncharacterized protein.	Crooked neck-like protein 1.	0.985
PROFUN_00742	PROFUN_06817	A0A2P6NUA3	A0A2P6NNG9	Uncharacterized protein.	Pre-mRNA-processing-splicing factor 8-like.	0.886
PROFUN_00742	PROFUN_08950	A0A2P6NUA3	A0A2P6NIQ4	Uncharacterized protein.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32.	0.827
PROFUN_00742	PROFUN_12574	A0A2P6NUA3	A0A2P6N6T8	Uncharacterized protein.	G-patch domain-containing protein.	0.756
PROFUN_00925	PROFUN_00742	A0A2P6N490	A0A2P6NUA3	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like.	Uncharacterized protein.	0.827
PROFUN_00925	PROFUN_01641	A0A2P6N490	A0A2P6NTT4	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like.	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like.	0.458
PROFUN_00925	PROFUN_01940	A0A2P6N490	A0A2P6NAY1	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like.	U5 small nuclear ribonucleoprotein component-like protein.	0.909
PROFUN_00925	PROFUN_02242	A0A2P6N490	A0A2P6NYC8	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like.	Pre-mRNA-processing factor 17-like.	0.884
PROFUN_00925	PROFUN_02344	A0A2P6N490	A0A2P6NYN3	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like.	Uncharacterized protein.	0.907
PROFUN_00925	PROFUN_04066	A0A2P6N490	A0A2P6NJD9	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like.	Uncharacterized protein.	0.873
PROFUN_00925	PROFUN_04222	A0A2P6N490	A0A2P6NVY5	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like.	Crooked neck-like protein 1.	0.859
PROFUN_00925	PROFUN_06817	A0A2P6N490	A0A2P6NNG9	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like.	Pre-mRNA-processing-splicing factor 8-like.	0.883
PROFUN_00925	PROFUN_12574	A0A2P6N490	A0A2P6N6T8	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like.	G-patch domain-containing protein.	0.820
PROFUN_01641	PROFUN_00925	A0A2P6NTT4	A0A2P6N490	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like.	0.458
PROFUN_01641	PROFUN_01940	A0A2P6NTT4	A0A2P6NAY1	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like.	U5 small nuclear ribonucleoprotein component-like protein.	0.981

page 1 of 6

Server load: low (28%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About