STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_10736Uncharacterized protein. (313 aa)    
Predicted Functional Partners:
PROFUN_13760
Gamma-glutamyl phosphate reductase.
      
 0.559
PROFUN_16099
WD domain protein.
    
 0.547
PROFUN_07422
WD40 repeat-containing protein.
    
 0.547
PROFUN_07533
WD domain protein.
    
 0.547
PROFUN_11011
RING-type domain-containing protein.
   
 
 0.546
PROFUN_08061
3-ketoacyl-CoA thiolase A.
   
 
 0.536
PROFUN_00025
Ubiquitin.
    
  0.523
PROFUN_04911
Pex2_Pex12 domain-containing protein.
     
 0.521
PROFUN_15103
Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
   
 0.498
PROFUN_07927
Peroxisomal membrane protein PEX14-like.
    
 0.487
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.