STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_1216526S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (424 aa)    
Predicted Functional Partners:
PROFUN_03560
26S proteasome non-ATPase regulatory subunit 12-like isoform 1.
   
 0.999
PROFUN_14380
PCI domain-containing protein.
   
 0.999
PROFUN_13212
Proteasome subunit alpha type.
  
 0.999
PROFUN_13006
26S proteasome regulatory subunit; Belongs to the AAA ATPase family.
  
0.999
PROFUN_12939
Proteasome 26S non-ATPase subunit 3-like.
   
 0.999
PROFUN_05923
26S proteasome non-ATPase regulatory subunit 8.
   
 0.999
PROFUN_01971
Regulatory particle triple-A ATPase 3; Belongs to the AAA ATPase family.
  
0.999
PROFUN_02044
26S proteasome subunit ATPase 5; Belongs to the AAA ATPase family.
  
0.999
PROFUN_01118
RPN2_C domain-containing protein; Belongs to the proteasome subunit S1 family.
   
 0.999
PROFUN_08370
26S protease regulatory subunit 7-like; Belongs to the AAA ATPase family.
  
0.999
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.