STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_11772Translation initiation factor eIF-5B. (897 aa)    
Predicted Functional Partners:
PROFUN_02915
60S ribosomal protein L8.
   
 0.950
PROFUN_11995
KH type-2 domain-containing protein.
   
 
 0.945
PROFUN_10089
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.944
PROFUN_00584
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.934
PROFUN_12016
40S ribosomal protein S5 isoform 1; Belongs to the universal ribosomal protein uS7 family.
   
 0.926
PROFUN_00587
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.920
PROFUN_04869
S60 ribosomal protein L10.
   
 0.917
PROFUN_12015
Uncharacterized protein.
  
 0.913
PROFUN_02560
Putative 60S ribosomal protein L23.
   
 
 0.908
PROFUN_11954
40S ribosomal protein S9.
   
 
 0.908
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.