STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_02083Uncharacterized protein. (676 aa)    
Predicted Functional Partners:
PROFUN_14812
Nucleoporin GLE1-like.
    
 0.700
PROFUN_11861
40s ribosomal protein s15a; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.688
PROFUN_11163
40S ribosomal protein S28.
   
   0.659
PROFUN_05594
Uncharacterized protein.
   
 0.648
PROFUN_00587
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.626
PROFUN_07623
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.623
PROFUN_00584
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.622
PROFUN_11493
Uncharacterized protein.
   
 
 0.614
PROFUN_09848
F-box domain-containing protein.
    
 0.610
PROFUN_08092
Histone chaperone asf-1.
    
 0.610
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.