STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_10879Uncharacterized protein. (1564 aa)    
Predicted Functional Partners:
PROFUN_12179
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.982
PROFUN_04177
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.971
PROFUN_02075
Sorting nexin-3-like.
    
 0.953
PROFUN_07693
TBC1 domain family member 5-like.
   
 
 0.703
PROFUN_03507
Vacuolar protein sorting-associated protein vps5.
    
 
 0.675
PROFUN_14605
PX domain protein.
    
 
 0.675
PROFUN_13443
DUF3818 domain-containing protein.
    
 
 0.675
PROFUN_07955
DUF3818 domain-containing protein.
    
 
 0.675
PROFUN_16425
VPS10 domain-containing protein.
    
 
 0.513
PROFUN_13505
Sortilin.
    
 
 0.513
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.