STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_01158DH domain-containing protein. (572 aa)    
Predicted Functional Partners:
PROFUN_10132
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.566
PROFUN_09463
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.566
PROFUN_12863
Rho GTPase.
  
 
 0.548
PROFUN_10418
Ras-related C3 botulinum toxin substrate 1-like.
  
 
 0.536
PROFUN_00538
Rho GTPase.
  
 
 0.533
PROFUN_01467
Ras-related C3 botulinum toxin substrate 1-like.
  
 
 0.532
PROFUN_11263
Small GTPase.
  
 
 0.530
PROFUN_03348
Ras-related C3 botulinum toxin substrate 1-like.
  
 
 0.529
PROFUN_09545
Uncharacterized protein.
     
0.525
PROFUN_12713
Small GTPase Rac1.
  
 
 0.521
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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