STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_10230Uncharacterized protein. (622 aa)    
Predicted Functional Partners:
PROFUN_05594
Uncharacterized protein.
    
 0.702
PROFUN_09604
TROVE domain-containing protein.
   
 0.647
PROFUN_12747
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.628
PROFUN_08164
Uncharacterized protein.
   
 0.622
PROFUN_12842
Uncharacterized protein.
    
  0.601
PROFUN_10068
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.594
PROFUN_15761
Retinoblastoma-binding protein 5.
    
 0.593
PROFUN_11501
WD_REPEATS_REGION domain-containing protein.
    
 0.593
PROFUN_02983
Nuclear pore complex protein.
    
 0.590
PROFUN_10073
Uncharacterized protein.
    
 0.574
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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