STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_04922Ubiquitin family protein. (166 aa)    
Predicted Functional Partners:
PROFUN_05004
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.971
PROFUN_01630
SUMO-specific protease U1p1.
   
 0.969
PROFUN_11880
SUMO-activating enzyme subunit 1-like.
   
 0.968
PROFUN_08888
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
   
 0.963
PROFUN_03258
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.955
PROFUN_07999
Uncharacterized protein.
    
 0.926
PROFUN_09688
ULP_PROTEASE domain-containing protein.
    
 0.903
PROFUN_07867
ULP_PROTEASE domain-containing protein.
    
 0.903
PROFUN_04995
Structural maintenance of chromosome protein.
   
 0.875
PROFUN_15123
Uncharacterized protein.
    
 0.860
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.