STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_09474Uncharacterized protein. (561 aa)    
Predicted Functional Partners:
PROFUN_14193
Spindle pole body component.
    
 0.607
PROFUN_04981
Spindle pole body component.
    
 0.582
PROFUN_00199
Spindle pole body component.
    
 0.582
PROFUN_13497
Spindle pole body component.
    
 0.550
PROFUN_15754
Spindle pole body component.
    
 0.533
PROFUN_04434
Spindle pole body component.
    
 0.533
PROFUN_07830
Uncharacterized protein.
    
 0.514
PROFUN_00379
SET domain-containing protein.
   
 0.513
PROFUN_13865
Tubulin domain-containing protein; Belongs to the tubulin family.
   
 0.446
PROFUN_09255
Tubulin domain-containing protein; Belongs to the tubulin family.
   
 0.446
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.