STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_09135ATP-binding cassette sub-family D member 2-like. (772 aa)    
Predicted Functional Partners:
PROFUN_09126
Uncharacterized protein.
  
 
 0.851
PROFUN_05302
Peroxisome biogenesis protein 19-1-like.
    
 0.840
PROFUN_02309
Peroxisomal biogenesis factor 3.
   
 0.791
PROFUN_07927
Peroxisomal membrane protein PEX14-like.
   
 0.762
PROFUN_10336
SH3 domain-containing protein.
   
 
 0.737
PROFUN_10049
SH3 domain-containing protein.
   
 
 0.737
PROFUN_04911
Pex2_Pex12 domain-containing protein.
   
 
 0.729
PROFUN_07918
ATPase.
  
0.692
PROFUN_02670
Uncharacterized protein.
  
0.692
PROFUN_00576
ABC transporter D family protein.
  
0.683
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.