STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_08653SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (551 aa)    
Predicted Functional Partners:
PROFUN_11295
Bifunctional dihydrofolate reductase-thymidylate synthase.
  
 
  0.841
PROFUN_09285
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
 
 
  
 0.788
PROFUN_11059
PUA domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
 
 0.762
PROFUN_11786
Brix domain-containing protein.
   
   0.760
PROFUN_08050
Nucleolar complex protein 2.
   
 
 0.743
PROFUN_09208
Uncharacterized protein.
   
 
 0.738
PROFUN_08010
Ribosome biogenesis protein bop1-like.
   
 
 0.737
PROFUN_02572
Brix domain-containing protein.
   
 
 0.727
PROFUN_10773
MKI67 FHA domain-interacting nucleolar phosphoprotein.
   
 
 0.722
PROFUN_11060
CBF domain-containing protein.
   
 
 0.716
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.