STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_08493Sorbitol dehydrogenase-2-like. (621 aa)    
Predicted Functional Partners:
PROFUN_10246
Uncharacterized protein.
  
 
 0.786
PROFUN_05203
Anthranilate synthase component 2.
  
 0.765
PROFUN_11259
Iron-containing alcohol dehydrogenase.
  
 
 0.757
PROFUN_04292
Phosphoglucomutase, chloroplastic-like.
   
 0.722
PROFUN_01772
Serine C-palmitoyltransferase subunit.
  
 
 0.719
PROFUN_13785
Serine C-palmitoyltransferase subunit.
  
 
 0.719
PROFUN_10896
Aminotran_1_2 domain-containing protein.
  
 
 0.719
PROFUN_03040
Aminotran_1_2 domain-containing protein.
 
 
 0.719
PROFUN_00710
Dihydroxyacetone kinase.
   
 0.705
PROFUN_04068
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
  
 
 0.680
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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