STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_07349Amino acid transporter. (583 aa)    
Predicted Functional Partners:
PROFUN_02238
Nudix (Nucleoside diphosphate linked moiety X)-type motif 12.
    
 0.840
PROFUN_05203
Anthranilate synthase component 2.
    
 
 0.676
PROFUN_05594
Uncharacterized protein.
    
 0.603
PROFUN_05668
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
   
 0.564
PROFUN_08424
DHQ_synthase domain-containing protein.
   
 0.564
PROFUN_05736
Mastigoneme-like protein.
    
 0.475
PROFUN_02456
Insulin receptor isoform 1.
    
 0.448
PROFUN_15821
RGS domain-containing protein.
   
 0.419
PROFUN_11746
DNA repair system specific for alkylated DNA.
   
 0.419
PROFUN_14578
Alpha amylase domain-containing protein.
   
 0.419
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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