STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_06898Uncharacterized protein. (692 aa)    
Predicted Functional Partners:
PROFUN_14696
Uncharacterized protein.
   
 
  0.470
PROFUN_08129
BTB domain-containing protein.
   
 
 0.464
PROFUN_03720
BTB domain-containing protein.
   
 
 0.461
PROFUN_12832
Calcium-activated BK potassium channel, alpha subunit.
     
 0.457
PROFUN_09092
Uncharacterized protein.
     
 0.457
PROFUN_10908
Ion_trans domain-containing protein.
   
 
 0.435
PROFUN_10378
Ion transport protein.
   
 
 0.435
PROFUN_09086
Inward rectifier potassium channel 2-like isoform 3.
     
 0.404
PROFUN_03246
K+ channel protein.
     
 0.404
PROFUN_00846
K+ channel protein.
     
 0.404
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.