STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_05435Arrestin domain containing 4. (877 aa)    
Predicted Functional Partners:
PROFUN_09645
Thioredoxin; Belongs to the thioredoxin family.
    
 0.658
PROFUN_02996
Uncharacterized protein.
    
 0.658
PROFUN_00523
Thioredoxin.
    
 0.567
PROFUN_09076
Thioredoxin, mitochondrial-like.
    
 0.567
PROFUN_11767
Uncharacterized protein.
    
 
 0.559
PROFUN_08739
NEDD4-like E3 ubiquitin-protein ligase WWP1-like.
    
 
 0.559
PROFUN_01867
WW domain-containing protein.
    
 
 0.559
PROFUN_03475
DnaJ domain containing protein.
    
 0.534
PROFUN_12658
Thioredoxin domain-containing protein.
    
 0.513
PROFUN_12176
Protein disulfide isomerase-like 2-1-like; Belongs to the protein disulfide isomerase family.
    
 0.513
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.