STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_05187Ribosomal_L7Ae domain-containing protein. (223 aa)    
Predicted Functional Partners:
PROFUN_13705
snoRNP pseudouridylase box H/ACA snoRNP complex protein Gar1.
   
 0.999
PROFUN_04204
H/ACA ribonucleoprotein complex subunit 3.
   
 0.999
PROFUN_06163
rRNA 2'-O-methyltransferase fibrillarin.
   
 0.993
PROFUN_03624
Nucleolar protein 58.
   
 0.987
PROFUN_11059
PUA domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 0.977
PROFUN_05274
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
  
 0.976
PROFUN_10171
PUA domain-containing protein.
  
 0.973
PROFUN_03961
Putative tRNA pseudouridine synthase 1 isoform 1.
  
 0.973
PROFUN_00929
tRNA pseudouridine synthase B.
  
 0.973
PROFUN_08122
C2H2-type domain-containing protein.
   
 0.964
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.