STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_02881Isocitrate dehydrogenase [NAD] subunit, mitochondrial. (368 aa)    
Predicted Functional Partners:
PROFUN_04217
Isocitrate dehydrogenase (NAD+).
  
0.991
PROFUN_11158
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.938
PROFUN_06763
2-oxoglutarate dehydrogenase, E1 subunit.
   
 0.936
PROFUN_00416
Pyruvate carboxyltransferase domain-containing protein.
  
 0.924
PROFUN_06598
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.922
PROFUN_14908
Aconitate hydratase.
  
 0.922
PROFUN_11457
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.922
PROFUN_04707
Iso_dh domain-containing protein.
  
 0.922
PROFUN_08270
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.899
PROFUN_02081
Aspartate aminotransferase.
   
 0.889
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.