STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_05012Uncharacterized protein. (201 aa)    
Predicted Functional Partners:
PROFUN_09193
G patch domain and KOW motifs-containing protein-like.
   
   0.830
PROFUN_00066
Postsynaptic-related protein.
    
 
 0.824
PROFUN_07379
Splicing factor 3B subunit 1.
    
   0.823
PROFUN_00746
Uncharacterized protein.
    
 
 0.823
PROFUN_12790
Peptidyl-prolyl cis-trans isomerase.
    
   0.823
PROFUN_01940
U5 small nuclear ribonucleoprotein component-like protein.
    
   0.823
PROFUN_02010
Putative Puff-specific protein Bx42.
    
   0.823
PROFUN_04557
Sm domain-containing protein.
    
   0.823
PROFUN_11061
Rho-GAP domain-containing protein.
    
   0.823
PROFUN_01148
RRM domain-containing protein.
    
   0.823
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.