STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_01425Uncharacterized protein. (1329 aa)    
Predicted Functional Partners:
PROFUN_02238
Nudix (Nucleoside diphosphate linked moiety X)-type motif 12.
    
  0.850
PROFUN_04356
Uncharacterized protein.
    
 0.835
PROFUN_01222
E3 ubiquitin-protein ligase RBX1.
    
 0.835
PROFUN_02565
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.824
PROFUN_10938
Uncharacterized protein.
    
 0.824
PROFUN_06098
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.824
PROFUN_05722
Cytosolic glycoprotein FP21; Belongs to the SKP1 family.
    
 0.824
PROFUN_00654
Protein kinase domain-containing protein.
    
 0.759
PROFUN_02669
Glycogen synthase kinase 3; Belongs to the peptidase C2 family.
    
 0.759
PROFUN_15631
Cullin C; Belongs to the cullin family.
   
 0.756
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.