STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_01543NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (326 aa)    
Predicted Functional Partners:
PROFUN_03316
Uncharacterized protein.
 
 
 
 0.923
PROFUN_03816
Uncharacterized protein.
  
 0.906
PROFUN_02305
OMPdecase domain-containing protein.
  
 
 0.906
PROFUN_05003
Nitrate reductase.
   
0.897
PROFUN_04784
Dihydropyrimidinase.
  
 
 0.896
PROFUN_01705
Uncharacterized protein.
  
 0.892
PROFUN_13841
Uncharacterized protein.
  
 0.892
PROFUN_02219
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.892
PROFUN_01302
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 0.854
PROFUN_01003
Uncharacterized protein.
  
 
 0.751
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.