STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_03261Uncharacterized protein; Belongs to the cytochrome P450 family. (516 aa)    
Predicted Functional Partners:
PROFUN_05003
Nitrate reductase.
    
 0.872
PROFUN_07344
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.695
PROFUN_05563
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.653
PROFUN_12335
Uncharacterized protein.
     
 0.626
PROFUN_14650
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.595
PROFUN_10075
Tryptophane synthase.
    
 0.592
PROFUN_06958
AMP-binding domain-containing protein.
   
 0.559
PROFUN_09596
Lathosterol oxidase; Belongs to the sterol desaturase family.
   
 0.544
PROFUN_02073
Cytoplasmic protein; Belongs to the cytochrome b5 family.
    
 0.535
PROFUN_10906
Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery.
    
 0.535
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.