STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_03397Uncharacterized protein. (374 aa)    
Predicted Functional Partners:
PROFUN_12320
tRNA modification GTPase.
  
 0.926
PROFUN_02038
Uncharacterized protein.
  
 0.926
PROFUN_12409
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
 
      0.900
PROFUN_05307
Uncharacterized protein.
  
 0.745
PROFUN_03346
(5-methylaminomethyl-2-thiouridylate)-methyltran sferase.
  
 0.745
PROFUN_01677
Stress-response A/B barrel domain-containing protein.
   
 
 0.535
PROFUN_12057
DAO domain-containing protein.
   
 
 0.535
PROFUN_10926
Sarcosine oxidase.
   
 
 0.535
PROFUN_09913
NAD(P)-bd_dom domain-containing protein.
   
 
 0.535
PROFUN_02278
Rieske domain-containing protein.
   
 
 0.535
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.