STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_03151ANK_REP_REGION domain-containing protein. (1095 aa)    
Predicted Functional Partners:
PROFUN_10412
DNA-binding protein RFX2 isoform 1.
    
 0.713
PROFUN_10073
Uncharacterized protein.
    
 0.612
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.533
PROFUN_09445
Intraflagellar transport protein.
    
 0.520
PROFUN_07830
Uncharacterized protein.
    
 0.518
PROFUN_05689
Uncharacterized protein.
    
  0.505
PROFUN_02077
Uncharacterized protein.
    
 0.494
PROFUN_11190
Uncharacterized protein.
    
 0.486
PROFUN_10622
Baculoviral IAP repeat-containing protein 6.
   
 0.484
PROFUN_03674
Uncharacterized protein.
    
  0.475
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.