STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_03179Acetyl/propionyl-CoA carboxylase, carboxyltransferase subunit. (553 aa)    
Predicted Functional Partners:
PROFUN_05585
Methylcrotonyl-CoA carboxylase.
 
 0.999
PROFUN_14354
Acetyl/propionyl-CoA carboxylase, alpha subunit.
 
 0.986
PROFUN_00313
Propionyl-CoA carboxylase alpha chain-like.
 
 0.985
PROFUN_01571
Mitochondrial isovaleryl-CoA dehydrogenase.
 
 
 0.928
PROFUN_05870
Malate synthase.
  
 
 0.901
PROFUN_07613
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.881
PROFUN_12864
TH1 family protein.
  
 0.868
PROFUN_01190
Enoyl-CoA hydratase/isomerase.
  
 
 0.858
PROFUN_10153
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.834
PROFUN_06961
Non-specific lipid-transfer protein isoform 4 proprotein.
  
 
 0.834
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.