STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_02758Uncharacterized protein. (1123 aa)    
Predicted Functional Partners:
PROFUN_06148
Putative RNA binding protein.
   
  0.686
PROFUN_11473
NKAP-like protein-like.
   
 
  0.685
PROFUN_03227
Uncharacterized protein.
    
  0.672
PROFUN_16168
Smg4_UPF3 domain-containing protein.
   
  0.665
PROFUN_13642
Smg4_UPF3 domain-containing protein.
   
  0.665
PROFUN_05868
Pre-mRNA-splicing factor CWC22.
    
  0.663
PROFUN_09015
Uncharacterized protein.
   
 
  0.650
PROFUN_09457
Sde2_N_Ubi domain-containing protein.
     
 0.640
PROFUN_10946
Cir_N domain-containing protein.
   
 
  0.630
PROFUN_02242
Pre-mRNA-processing factor 17-like.
   
 
  0.628
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.