STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_02172Uncharacterized protein. (228 aa)    
Predicted Functional Partners:
PROFUN_05003
Nitrate reductase.
   
 
 0.759
PROFUN_08972
Short chain dehydrogenase.
  
 0.622
PROFUN_01655
Phosphotransferase.
   
 0.571
PROFUN_12646
ATP-synt_DE_N domain-containing protein.
   
 0.544
PROFUN_11259
Iron-containing alcohol dehydrogenase.
     
 0.535
PROFUN_07344
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.527
PROFUN_00946
Deoxyribose-phosphate aldolase.
    
 0.523
PROFUN_05038
Acetate--CoA ligase.
   
 
 0.518
PROFUN_01264
Acetyl-coenzyme A synthetase.
   
 
 0.518
PROFUN_12905
4-hydroxyphenylpyruvate dioxygenase.
     
 0.502
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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