STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_01300Fanconi anemia group D2 protein. (1478 aa)    
Predicted Functional Partners:
PROFUN_10119
Fanconi anemia group I protein.
  
 0.999
PROFUN_03038
E3 ubiquitin-protein ligase FANCL.
  
 
 0.992
PROFUN_10399
Uncharacterized protein.
   
 0.991
PROFUN_03864
WD repeat-containing protein 87.
   
 0.979
PROFUN_02382
BRCA2 repeat family protein.
   
 0.968
PROFUN_12015
Uncharacterized protein.
    
 0.965
PROFUN_00025
Ubiquitin.
    
  0.960
PROFUN_01413
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
    
 0.951
PROFUN_08710
Nuclear transport factor 2.
   
 0.944
PROFUN_08868
Nuclear protein localization protein 4.
    
 0.921
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.