STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_00802F-box domain-containing protein. (400 aa)    
Predicted Functional Partners:
PROFUN_05003
Nitrate reductase.
    
 0.841
PROFUN_05594
Uncharacterized protein.
    
 0.725
PROFUN_12842
Uncharacterized protein.
    
 0.641
PROFUN_06083
Robl_LC7 domain-containing protein.
    
 0.598
PROFUN_00584
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.595
PROFUN_10089
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
  0.590
PROFUN_12016
40S ribosomal protein S5 isoform 1; Belongs to the universal ribosomal protein uS7 family.
    
 0.589
PROFUN_04134
Ribosomal_S13_N domain-containing protein.
   
 0.587
PROFUN_14731
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
  0.583
PROFUN_04801
30S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
  0.579
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.