STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_00844RNA polymerase II-associated protein 3 isoform 3. (528 aa)    
Predicted Functional Partners:
PROFUN_08345
RuvB-like helicase; Belongs to the RuvB family.
    
 0.944
PROFUN_00354
Uncharacterized protein.
   
 0.942
PROFUN_12481
Uncharacterized protein; Belongs to the actin family.
   
 0.870
PROFUN_03000
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.869
PROFUN_12190
YL1_C domain-containing protein.
    
 0.796
PROFUN_09604
TROVE domain-containing protein.
   
 0.772
PROFUN_01410
DNA-directed RNA polymerase.
   
 0.725
PROFUN_08752
Uncharacterized protein.
   
 0.707
PROFUN_10362
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.696
PROFUN_09291
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.696
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.