STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHS25_003073Uncharacterized protein. (1153 aa)    
Predicted Functional Partners:
EHS25_005104
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.705
SPT3
Transcription initiation protein spt3.
    
 
 0.694
TAF9
Transcription initiation factor TFIID subunit 9.
   
 
 0.675
EHS25_010036
SGF29 C-terminal domain-containing protein.
    
 
 0.668
EHS25_007855
SAGA-associated factor 11.
    
 
 0.656
TAF10
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 
 0.635
ADA2
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 
 0.556
EHS25_008647
Uncharacterized protein.
    
 
 0.549
NGG1
Transcriptional regulator.
    
 
 0.549
EHS25_006271
TAF domain-containing protein.
    
 
 0.543
Your Current Organism:
Saitozyma podzolica
NCBI taxonomy Id: 1890683
Other names: ATCC 34208, CBS 6819, CBS6819, CCRC 21767, CCRC:21767, Cryptococcus podzolicus, DBVPG 7026, IFO 10333, IGC 4488, NRRL Y-12946, S. podzolica, Saitozyma podzolica (Babeva & Reshetova) X.Z. Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.