STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHS25_009850DAO domain-containing protein. (445 aa)    
Predicted Functional Partners:
EHS25_002662
Aminotran_5 domain-containing protein.
  
 
 0.794
TRP5
Tryptophan synthase.
    
  0.760
SHM2_1
Serine hydroxymethyltransferase, cytosolic.
    
 0.744
GLY1
Threonine aldolase.
    
 0.740
GCV2
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.733
HEM1
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
    
 0.721
EHS25_005858
DAO domain-containing protein.
   
 
 0.717
EHS25_009813
TPR_REGION domain-containing protein.
    
 0.626
EHS25_003656
Uncharacterized protein.
   
 
 0.618
EHS25_008734
Hcy-binding domain-containing protein.
   
 
 0.596
Your Current Organism:
Saitozyma podzolica
NCBI taxonomy Id: 1890683
Other names: ATCC 34208, CBS 6819, CBS6819, CCRC 21767, CCRC:21767, Cryptococcus podzolicus, DBVPG 7026, IFO 10333, IGC 4488, NRRL Y-12946, S. podzolica, Saitozyma podzolica (Babeva & Reshetova) X.Z. Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.