STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKY71217.1Hypothetical protein. (148 aa)    
Predicted Functional Partners:
OKY72700.1
Dethiobiotin synthetase.
  
     0.704
OKY70066.1
Hypothetical protein.
  
     0.642
OKY71157.1
Hypothetical protein.
  
     0.640
OKY70589.1
Hypothetical protein.
  
     0.638
OKY73385.1
Methionine synthase.
  
     0.617
OKY71189.1
Hypothetical protein.
  
     0.604
OKY72007.1
Hypothetical protein.
  
     0.586
OKY72696.1
Transglutaminase.
  
     0.565
OKY72986.1
Hypothetical protein.
  
     0.531
chlN
Light-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
       0.527
Your Current Organism:
Limnothrix sp. CACIAM
NCBI taxonomy Id: 1890733
Other names: L. sp. CACIAM 69d, Limnothrix sp. CACIAM 69d
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.