STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOL16279.1Acetylpolyamine aminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)    
Predicted Functional Partners:
rpl40e
50S ribosomal protein L40e; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL40 family.
    
  0.705
AOL17105.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.681
BFU36_01975
DNA lyase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.677
AOL17131.1
TATA box-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.662
AOL16277.1
Nitrilase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.643
AOL17607.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.640
AOL15977.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.640
AOL16183.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.640
AOL16714.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.
   
 0.640
AOL16278.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.630
Your Current Organism:
Sulfolobus sp. A20
NCBI taxonomy Id: 1891280
Other names: S. sp. A20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.