STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ90920.1Decaheme c-type cytochrome, DmsE family. (652 aa)    
Predicted Functional Partners:
APZ91849.1
Hypothetical protein.
  
     0.548
APZ92590.1
Hypothetical protein.
  
     0.487
APZ92591.1
Enterobactin/ferric enterobactin esterase.
  
    0.480
APZ94414.1
Tetratricopeptide repeat protein.
  
 
   0.442
APZ92603.1
RNA polymerase sigma factor.
  
     0.425
APZ95322.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.424
APZ95668.1
Putative PEP-CTERM system TPR-repeat lipoprotein.
  
     0.420
mraZ
Cell division protein; Belongs to the MraZ family.
       0.416
APZ96920.1
RNA polymerase sigma factor.
  
     0.412
APZ92307.1
RNA polymerase sigma factor.
  
     0.402
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.