STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywaD_1Arginyl aminopeptidase. (621 aa)    
Predicted Functional Partners:
ftsH_1
ATP-dependent zinc metalloprotease FtsH.
    
 0.824
ftsH_4
ATP-dependent zinc metalloprotease FtsH.
    
 0.824
APZ91650.1
Uridine/cytidine kinase.
   
 
  0.788
glpK_2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.784
APZ96748.1
PQQ-dependent catabolism-associated beta-propeller protein.
  
 0.738
APZ90582.1
PhoP regulatory network protein.
  
 0.734
APZ91907.1
Dual specificity phosphatase, catalytic domain.
   
 0.693
pepN
Aminopeptidase N.
 
 
 
 0.640
APZ90433.1
Putative multidrug export ATP-binding/permease protein.
    
 0.590
APZ90576.1
Putative multidrug export ATP-binding/permease protein.
    
 0.590
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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