STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ91187.1Putative heme-binding domain protein. (1376 aa)    
Predicted Functional Partners:
ctaC
Cytochrome c oxidase subunit 2 precursor.
  
 0.990
ctaD
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.983
APZ93879.1
Putative hydrogenase 2 b cytochrome subunit.
   
 
 0.783
tufA
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.768
APZ93389.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.752
APZ92336.1
Trehalose utilization.
  
     0.743
APZ95416.1
Putative membrane-bound dehydrogenase domain protein.
  
     0.714
APZ96443.1
Efflux transporter, RND family, MFP subunit.
  
     0.699
petC_1
Cytochrome b6-f complex iron-sulfur subunit.
  
 0.680
petC_2
Cytochrome b6-f complex iron-sulfur subunit.
  
 0.680
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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