STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ91369.1Decaheme c-type cytochrome, DmsE family. (625 aa)    
Predicted Functional Partners:
APZ91370.1
FG-GAP repeat.
 
     0.857
APZ91368.1
Hypothetical protein.
       0.773
APZ95668.1
Putative PEP-CTERM system TPR-repeat lipoprotein.
  
   0.585
APZ91374.1
Hypothetical protein.
 
    0.566
APZ96158.1
ATPase involved in DNA repair.
  
     0.566
APZ94414.1
Tetratricopeptide repeat protein.
 
     0.558
APZ93161.1
Putative membrane protein.
  
     0.554
APZ92568.1
Hypothetical protein.
  
     0.545
APZ92590.1
Hypothetical protein.
  
     0.525
APZ94415.1
Putative PEP-CTERM system TPR-repeat lipoprotein.
  
 
   0.520
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.