STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trkHTrk system potassium uptake protein TrkH. (543 aa)    
Predicted Functional Partners:
trkA
Trk system potassium uptake protein TrkA.
 
 
 0.892
APZ91360.1
Potassium/proton antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.880
nifJ
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.812
APZ91447.1
Hypothetical protein.
       0.773
APZ91449.1
Trehalose utilization.
       0.773
lysX_3
Alpha-aminoadipate--LysW ligase LysX; Belongs to the RimK family.
  
 
 0.539
kch
Voltage-gated potassium channel Kch.
  
 
 0.509
ktrA
Ktr system potassium uptake protein A.
  
 
 0.509
ybaL_2
Inner membrane protein YbaL.
  
 
 0.509
APZ96789.1
MlotiK1 channel.
  
 
 0.509
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.