STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ91490.1Recombination protein F. (392 aa)    
Predicted Functional Partners:
APZ91491.1
Hypothetical protein.
       0.773
APZ91492.1
Hypothetical protein.
       0.642
betC_4
Choline-sulfatase.
       0.629
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.581
APZ93354.1
Putative acetyltransferase.
   
    0.497
APZ94019.1
Putative acetyltransferase involved in intracellular survival.
   
    0.497
APZ95277.1
Putative acetyltransferase involved in intracellular survival.
   
    0.497
APZ95829.1
Putative conserved protein, contains FHA domain.
  
     0.414
APZ93309.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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