STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ91650.1Uridine/cytidine kinase. (204 aa)    
Predicted Functional Partners:
APZ90582.1
PhoP regulatory network protein.
    
 0.947
upp
Uracil phosphoribosyltransferase; Belongs to the UPRTase family.
  
 
 0.862
gapA
Glyceraldehyde-3-phosphate dehydrogenase 1; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 
 0.861
rebH_1
Flavin-dependent tryptophan halogenase RebH.
     
 0.792
ywaD_2
Arginyl aminopeptidase.
  
 
  0.789
ywaD_1
Arginyl aminopeptidase.
   
 
  0.788
serA_1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
  0.784
serA_2
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
  0.784
crtF
Demethylspheroidene O-methyltransferase.
     
 0.774
rebM
Demethylrebeccamycin-D-glucose O-methyltransferase.
     
 0.774
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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