STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ92483.1LysM domain/BON superfamily protein. (640 aa)    
Predicted Functional Partners:
rsmH
Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.799
APZ91725.1
Putative GTPase.
 
     0.745
APZ95652.1
Hypothetical protein.
  
     0.734
APZ96801.1
Putative membrane protein.
  
     0.720
APZ93489.1
Spermidine synthase.
  
     0.712
APZ91723.1
Hypothetical protein.
  
     0.711
APZ90642.1
Type IV pilus biogenesis/stability protein.
  
     0.704
APZ94689.1
Hypothetical protein.
  
     0.703
APZ95331.1
Type IV secretory pathway, VirB10 component.
  
     0.700
APZ93550.1
Hypothetical protein.
  
     0.698
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.